Carnation DB

Dca45590.1

Annotation

5-exons
f-1165
sp|Q9SYC1_ARATH#F11M15.5 protein#Arabidopsis thaliana (Mouse-ear cress)#Name=F11M15.5#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
Repeat List (scaffold5363)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45590.1	37	241	258	31.39	205	39	8e-36
Target_name	Start	End	Length	Cov(%)
sp\|Q9SYC1_ARATH	387	593	1295	15.98

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45590.1	93	240	258	20.54	148	35	3e-17
Target_name	Start	End	Length	Cov(%)
Os03t0439900-01	161	312	421	36.1

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5363	Augustus	mRNA	11747	14295	.	+	.	ID=Dca45590.1;Parent=Dca45590
scaffold5363	Augustus	exon	11747	11768	.	+	.	ID=Dca45590.1.exon1;Parent=Dca45590.1
scaffold5363	Augustus	exon	11904	12001	.	+	.	ID=Dca45590.1.exon2;Parent=Dca45590.1
scaffold5363	Augustus	exon	12287	12894	.	+	.	ID=Dca45590.1.exon3;Parent=Dca45590.1
scaffold5363	Augustus	exon	12976	13509	.	+	.	ID=Dca45590.1.exon4;Parent=Dca45590.1
scaffold5363	Augustus	exon	13617	14295	.	+	.	ID=Dca45590.1.exon5;Parent=Dca45590.1