Carnation DB

Dca45607.1

Annotation

5-exons
f-1
sp|Q2QV34_ORYSJ#Transposon protein, putative, CACTA, En/Spm sub-class#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g14180#unknown#0F0P0C
Repeat List (scaffold5369)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45607.1	109	216	224	25.89	108	54	2e-30
Target_name	Start	End	Length	Cov(%)
sp\|Q2QV34_ORYSJ	538	645	945	11.42

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45607.1	109	216	224	19.64	108	41	2e-18
Target_name	Start	End	Length	Cov(%)
Os08t0208400-02	660	767	829	13.02

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5369	Augustus	mRNA	6282	8337	.	-	.	ID=Dca45607.1;Parent=Dca45607
scaffold5369	Augustus	exon	6282	6310	.	-	.	ID=Dca45607.1.exon1;Parent=Dca45607.1
scaffold5369	Augustus	exon	6411	6732	.	-	.	ID=Dca45607.1.exon2;Parent=Dca45607.1
scaffold5369	Augustus	exon	6828	6908	.	-	.	ID=Dca45607.1.exon3;Parent=Dca45607.1
scaffold5369	Augustus	exon	7210	7320	.	-	.	ID=Dca45607.1.exon4;Parent=Dca45607.1
scaffold5369	Augustus	exon	8206	8337	.	-	.	ID=Dca45607.1.exon5;Parent=Dca45607.1