Carnation DB

Dca45702.1

Annotation

5-exons
f-1
sp|F4NCJ6_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
Os06t0484800-00 Reverse transcriptase domain containing protein.
Repeat List (scaffold5388)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45702.1	1	116	345	20.86	116	63	6e-34
Target_name	Start	End	Length	Cov(%)
sp\|F4NCJ6_BETVU	444	559	1355	8.56

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45702.1	8	116	345	14.2	109	45	2e-19
Target_name	Start	End	Length	Cov(%)
Os06t0484800-00	367	475	857	12.71

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5388	Augustus	mRNA	15458	19893	.	+	.	ID=Dca45702.1;Parent=Dca45702
scaffold5388	Augustus	exon	15458	15805	.	+	.	ID=Dca45702.1.exon1;Parent=Dca45702.1
scaffold5388	Augustus	exon	18058	18104	.	+	.	ID=Dca45702.1.exon2;Parent=Dca45702.1
scaffold5388	Augustus	exon	18298	18352	.	+	.	ID=Dca45702.1.exon3;Parent=Dca45702.1
scaffold5388	Augustus	exon	18438	18705	.	+	.	ID=Dca45702.1.exon4;Parent=Dca45702.1
scaffold5388	Augustus	exon	19574	19893	.	+	.	ID=Dca45702.1.exon5;Parent=Dca45702.1