Dca45811.1
Annotation
- 2-exons
- f-1
- sp|Q9ZVE4_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g06840#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold540)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45811.1 |
1 |
208 |
208 |
58.17 |
208 |
51 |
4e-65
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZVE4_ARATH |
816 |
1053 |
1102 |
21.59 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45811.1 |
1 |
208 |
208 |
50.96 |
208 |
45 |
7e-56
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
310 |
547 |
1262 |
18.85 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold540 |
Augustus |
mRNA |
99637 |
100353 |
. |
- |
. |
ID=Dca45811.1;Parent=Dca45811 |
| scaffold540 |
Augustus |
exon |
99637 |
99925 |
. |
- |
. |
ID=Dca45811.1.exon1;Parent=Dca45811.1 |
| scaffold540 |
Augustus |
exon |
100016 |
100353 |
. |
- |
. |
ID=Dca45811.1.exon2;Parent=Dca45811.1 |
