Dca45816.1
Annotation
- 3-exons
- f-1
- sp|Q850U9_ORYSJ#Putative gag-pol polyprotein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0037J17.27#GO:0003676#1F0P0C
- Repeat List (scaffold5401)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45816.1 |
479 |
800 |
804 |
23.5 |
322 |
55 |
2e-103
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q850U9_ORYSJ |
200 |
545 |
547 |
63.25 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45816.1 |
687 |
783 |
804 |
4.6 |
97 |
39 |
5e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1284 |
1378 |
1401 |
6.78 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5401 |
Augustus |
mRNA |
17440 |
21937 |
. |
- |
. |
ID=Dca45816.1;Parent=Dca45816 |
| scaffold5401 |
Augustus |
exon |
17440 |
17798 |
. |
- |
. |
ID=Dca45816.1.exon1;Parent=Dca45816.1 |
| scaffold5401 |
Augustus |
exon |
18153 |
18849 |
. |
- |
. |
ID=Dca45816.1.exon2;Parent=Dca45816.1 |
| scaffold5401 |
Augustus |
exon |
20579 |
21937 |
. |
- |
. |
ID=Dca45816.1.exon3;Parent=Dca45816.1 |
