Carnation DB

Dca45827.1

Annotation

6-exons
f-1
sp|D7SKQ9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0004g03620#GO:0005524;GO:0004707#2F0P0C
sp|Q8LT15_SOLTU#Mitogen-activated protein kinase#Solanum tuberosum (Potato)#Name=StMPK4#GO:0005524;GO:0004707#2F0P0C
Repeat List (scaffold5407)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45827.1	1	372	373	80.96	372	82	0
Target_name	Start	End	Length	Cov(%)
sp\|D7SKQ9_VITVI	1	370	371	99.73

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45827.1	1	366	373	74.79	366	77	7e-173
Target_name	Start	End	Length	Cov(%)
AT1G07880.2	1	360	363	99.17

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5407	Augus-PASA	mRNA	10843	15408	.	+	.	ID=Dca45827.1;Parent=Dca45827
scaffold5407	Augus-PASA	exon	10843	11003	.	+	.	ID=Dca45827.1.exon1;Parent=Dca45827.1
scaffold5407	Augus-PASA	exon	12755	12884	.	+	.	ID=Dca45827.1.exon2;Parent=Dca45827.1
scaffold5407	Augus-PASA	exon	13202	13339	.	+	.	ID=Dca45827.1.exon3;Parent=Dca45827.1
scaffold5407	Augustus	exon	13987	14319	.	+	.	ID=Dca45827.1.exon4;Parent=Dca45827.1
scaffold5407	Augustus	exon	14860	15043	.	+	.	ID=Dca45827.1.exon5;Parent=Dca45827.1
scaffold5407	Augustus	exon	15233	15408	.	+	.	ID=Dca45827.1.exon6;Parent=Dca45827.1