Carnation DB

Dca45875.1

Annotation

5-exons
f-1
sp|B9ICR0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_575644#unknown#0F0P0C
AT3G54070.1 | Symbols: | Ankyrin repeat family protein | chr3:20021330-20023603 REVERSE LENGTH=574
Repeat List (scaffold542)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45875.1	1	436	447	45.41	436	45	4e-99
Target_name	Start	End	Length	Cov(%)
sp\|B9ICR0_POPTR	200	652	743	60.96

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45875.1	1	442	447	38.47	442	37	3e-74
Target_name	Start	End	Length	Cov(%)
AT3G54070.1	59	486	574	74.56

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold542	Augustus	mRNA	36891	38938	.	+	.	ID=Dca45875.1;Parent=Dca45875
scaffold542	Augustus	exon	36891	37317	.	+	.	ID=Dca45875.1.exon1;Parent=Dca45875.1
scaffold542	Augustus	exon	37446	37598	.	+	.	ID=Dca45875.1.exon2;Parent=Dca45875.1
scaffold542	Augustus	exon	37719	38143	.	+	.	ID=Dca45875.1.exon3;Parent=Dca45875.1
scaffold542	Augustus	exon	38499	38797	.	+	.	ID=Dca45875.1.exon4;Parent=Dca45875.1
scaffold542	Augustus	exon	38899	38938	.	+	.	ID=Dca45875.1.exon5;Parent=Dca45875.1