Carnation DB

Dca45974.1

Annotation

6-exons
f-1
sp|F6I741_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VIT_00s0203g00130#GO:0016020;GO:0003676;GO:0005337;GO:0004523#3F0P1C
sp|B9H1Z9_POPTR#Equilibrative nucleoside transporter#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_817747#GO:0016020;GO:0005337#1F0P1C
Repeat List (scaffold544)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45974.1	247	377	384	16.14	131	44	3e-23
Target_name	Start	End	Length	Cov(%)
sp\|F6I741_VITVI	660	794	1063	12.69

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45974.1	243	377	384	17.44	135	47	3e-25
Target_name	Start	End	Length	Cov(%)
AT4G05120.1	11	149	418	33.25

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold544	Augustus	mRNA	59759	65766	.	+	.	ID=Dca45974.1;Parent=Dca45974
scaffold544	Augustus	exon	59759	60129	.	+	.	ID=Dca45974.1.exon1;Parent=Dca45974.1
scaffold544	Augustus	exon	60870	61166	.	+	.	ID=Dca45974.1.exon2;Parent=Dca45974.1
scaffold544	Augustus	exon	61266	61335	.	+	.	ID=Dca45974.1.exon3;Parent=Dca45974.1
scaffold544	Augustus	exon	64353	64457	.	+	.	ID=Dca45974.1.exon4;Parent=Dca45974.1
scaffold544	Augustus	exon	65209	65352	.	+	.	ID=Dca45974.1.exon5;Parent=Dca45974.1
scaffold544	Augustus	exon	65599	65766	.	+	.	ID=Dca45974.1.exon6;Parent=Dca45974.1