Carnation DB

Dca46087.1

Annotation

9-exons
f-1
sp|D7TDK7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0127g00120#GO:0005576;GO:0004650;GO:0005975;GO:0007047#1F2P1C
sp|B9SPH9_RICCO#Polygalacturonase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0023860#GO:0005576;GO:0047911;GO:0004650;GO:0005975;GO:0007047#2F2P1C
Repeat List (scaffold5467)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46087.1	23	487	489	61.55	465	64	3e-170
Target_name	Start	End	Length	Cov(%)
sp\|D7TDK7_VITVI	22	478	479	95.4

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46087.1	1	485	489	58.07	485	58	6e-158
Target_name	Start	End	Length	Cov(%)
AT3G26610.1	1	468	470	99.57

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5467	Augustus	mRNA	12013	16819	.	+	.	ID=Dca46087.1;Parent=Dca46087
scaffold5467	Augustus	exon	12013	12279	.	+	.	ID=Dca46087.1.exon1;Parent=Dca46087.1
scaffold5467	Augustus	exon	12772	12900	.	+	.	ID=Dca46087.1.exon2;Parent=Dca46087.1
scaffold5467	Augustus	exon	13427	13600	.	+	.	ID=Dca46087.1.exon3;Parent=Dca46087.1
scaffold5467	Augustus	exon	14148	14189	.	+	.	ID=Dca46087.1.exon4;Parent=Dca46087.1
scaffold5467	Augustus	exon	14442	14483	.	+	.	ID=Dca46087.1.exon5;Parent=Dca46087.1
scaffold5467	Augustus	exon	14564	14771	.	+	.	ID=Dca46087.1.exon6;Parent=Dca46087.1
scaffold5467	Augustus	exon	15887	15968	.	+	.	ID=Dca46087.1.exon7;Parent=Dca46087.1
scaffold5467	Augustus	exon	16080	16188	.	+	.	ID=Dca46087.1.exon8;Parent=Dca46087.1
scaffold5467	Augustus	exon	16403	16819	.	+	.	ID=Dca46087.1.exon9;Parent=Dca46087.1