Carnation DB

Dca46113.1

Annotation

5-exons
f-1
sp|A5CBQ4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_013115#GO:0003676;GO:0015074#1F1P0C
Os11t0656500-01 Integrase, catalytic core domain containing protein.
Repeat List (scaffold5474)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46113.1	224	609	616	33.11	386	51	6e-111
Target_name	Start	End	Length	Cov(%)
sp\|A5CBQ4_VITVI	407	793	1178	32.85

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46113.1	234	609	616	19.64	376	31	1e-45
Target_name	Start	End	Length	Cov(%)
Os11t0656500-01	634	1013	1401	27.12

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5474	Augustus	mRNA	296	6557	.	+	.	ID=Dca46113.1;Parent=Dca46113
scaffold5474	Augustus	exon	296	568	.	+	.	ID=Dca46113.1.exon1;Parent=Dca46113.1
scaffold5474	Augustus	exon	950	1073	.	+	.	ID=Dca46113.1.exon2;Parent=Dca46113.1
scaffold5474	Augustus	exon	4353	4624	.	+	.	ID=Dca46113.1.exon3;Parent=Dca46113.1
scaffold5474	Augustus	exon	5294	5881	.	+	.	ID=Dca46113.1.exon4;Parent=Dca46113.1
scaffold5474	Augustus	exon	5964	6557	.	+	.	ID=Dca46113.1.exon5;Parent=Dca46113.1