Carnation DB

Dca46149.1

Annotation

7-exons
f-1
sp|B9HUR4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1090203#unknown#0F0P0C
sp|B9RTK7_RICCO#Ice binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0911120#unknown#0F0P0C
Repeat List (scaffold5484)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46149.1	13	484	484	69	472	68	4e-167
Target_name	Start	End	Length	Cov(%)
sp\|B9HUR4_POPTR	9	485	485	98.35

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46149.1	12	484	484	65.7	473	66	2e-159
Target_name	Start	End	Length	Cov(%)
AT3G22810.1	8	472	472	98.51

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5484	Augustus	mRNA	6269	14054	.	-	.	ID=Dca46149.1;Parent=Dca46149
scaffold5484	Augustus	exon	6269	6486	.	-	.	ID=Dca46149.1.exon1;Parent=Dca46149.1
scaffold5484	Augustus	exon	7192	7249	.	-	.	ID=Dca46149.1.exon2;Parent=Dca46149.1
scaffold5484	Augustus	exon	7681	7730	.	-	.	ID=Dca46149.1.exon3;Parent=Dca46149.1
scaffold5484	Augustus	exon	7838	8056	.	-	.	ID=Dca46149.1.exon4;Parent=Dca46149.1
scaffold5484	Augustus	exon	8405	8843	.	-	.	ID=Dca46149.1.exon5;Parent=Dca46149.1
scaffold5484	Augustus	exon	12455	12562	.	-	.	ID=Dca46149.1.exon6;Parent=Dca46149.1
scaffold5484	Augustus	exon	13692	14054	.	-	.	ID=Dca46149.1.exon7;Parent=Dca46149.1