Carnation DB

Dca46179.1

Annotation

12-exons
f-1
sp|B9T613_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1054840#GO:0016020;GO:0055085#0F1P1C
AT5G10490.1 | Symbols: MSL2 | MSCS-like 2 | chr5:3300376-3304005 REVERSE LENGTH=673
Repeat List (scaffold549)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46179.1	275	821	822	44.03	547	57	0
Target_name	Start	End	Length	Cov(%)
sp\|B9T613_RICCO	2	638	654	97.4

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46179.1	196	822	822	43.06	627	53	0
Target_name	Start	End	Length	Cov(%)
AT5G10490.1	21	661	673	95.24

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold549	Augustus	mRNA	90691	98220	.	+	.	ID=Dca46179.1;Parent=Dca46179
scaffold549	Augustus	exon	90691	91297	.	+	.	ID=Dca46179.1.exon1;Parent=Dca46179.1
scaffold549	Augustus	exon	92873	93008	.	+	.	ID=Dca46179.1.exon2;Parent=Dca46179.1
scaffold549	Augustus	exon	93640	93729	.	+	.	ID=Dca46179.1.exon3;Parent=Dca46179.1
scaffold549	Augustus	exon	94053	94176	.	+	.	ID=Dca46179.1.exon4;Parent=Dca46179.1
scaffold549	Augustus	exon	95198	95295	.	+	.	ID=Dca46179.1.exon5;Parent=Dca46179.1
scaffold549	Augustus	exon	95452	95565	.	+	.	ID=Dca46179.1.exon6;Parent=Dca46179.1
scaffold549	Augustus	exon	95888	95948	.	+	.	ID=Dca46179.1.exon7;Parent=Dca46179.1
scaffold549	Augustus	exon	96065	96214	.	+	.	ID=Dca46179.1.exon8;Parent=Dca46179.1
scaffold549	Augustus	exon	96597	96764	.	+	.	ID=Dca46179.1.exon9;Parent=Dca46179.1
scaffold549	Augustus	exon	96896	97009	.	+	.	ID=Dca46179.1.exon10;Parent=Dca46179.1
scaffold549	Augustus	exon	97180	97236	.	+	.	ID=Dca46179.1.exon11;Parent=Dca46179.1
scaffold549	Augustus	exon	97471	98220	.	+	.	ID=Dca46179.1.exon12;Parent=Dca46179.1