Carnation DB

Dca46282.1

Annotation

6-exons
f-1654
sp|E7BQD5_SILLA#Gag-pol polyprotein#Silene latifolia (White campion) (Bladder campion)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
Repeat List (scaffold5503)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46282.1	1	81	306	21.56	81	74	6e-31
Target_name	Start	End	Length	Cov(%)
sp\|E7BQD5_SILLA	796	885	1475	6.1

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46282.1	5	69	306	9.15	65	44	3e-11
Target_name	Start	End	Length	Cov(%)
Os04t0191000-01	782	846	1539	4.22

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5503	Augustus	mRNA	2423	8565	.	-	.	ID=Dca46282.1;Parent=Dca46282
scaffold5503	Augustus	exon	2423	3106	.	-	.	ID=Dca46282.1.exon1;Parent=Dca46282.1
scaffold5503	Augustus	exon	3697	3973	.	-	.	ID=Dca46282.1.exon2;Parent=Dca46282.1
scaffold5503	Augustus	exon	6209	6795	.	-	.	ID=Dca46282.1.exon3;Parent=Dca46282.1
scaffold5503	Augustus	exon	7375	7584	.	-	.	ID=Dca46282.1.exon4;Parent=Dca46282.1
scaffold5503	Augustus	exon	7661	7961	.	-	.	ID=Dca46282.1.exon5;Parent=Dca46282.1
scaffold5503	Augustus	exon	8051	8565	.	-	.	ID=Dca46282.1.exon6;Parent=Dca46282.1