Dca46337.1
Annotation
- 3-exons
- f-1
- sp|Q5WMT5_ORYSJ#Putative polyprotein#Oryza sativa subsp japonica (Rice)#Name=OJ1116_F05.9#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold5519)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46337.1 |
1 |
301 |
301 |
36.87 |
301 |
33 |
3e-40
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q5WMT5_ORYSJ |
644 |
954 |
1186 |
26.22 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46337.1 |
4 |
104 |
301 |
12.29 |
101 |
36 |
3e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
675 |
778 |
1539 |
6.75 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5519 |
Augustus |
mRNA |
2718 |
4157 |
. |
- |
. |
ID=Dca46337.1;Parent=Dca46337 |
| scaffold5519 |
Augustus |
exon |
2718 |
3003 |
. |
- |
. |
ID=Dca46337.1.exon1;Parent=Dca46337.1 |
| scaffold5519 |
Augustus |
exon |
3310 |
3612 |
. |
- |
. |
ID=Dca46337.1.exon2;Parent=Dca46337.1 |
| scaffold5519 |
Augustus |
exon |
3841 |
4157 |
. |
- |
. |
ID=Dca46337.1.exon3;Parent=Dca46337.1 |
