Dca46372.1
Annotation
- 2-exons
- f-1
- sp|E4Z8P7_MALDO#Putative retrotransposon protein#Malus domestica (Apple) (Pyrus malus)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold5525)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46372.1 |
2 |
181 |
208 |
40.38 |
180 |
46 |
3e-46
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E4Z8P7_MALDO |
1165 |
1350 |
1353 |
13.74 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46372.1 |
43 |
109 |
208 |
14.42 |
67 |
45 |
6e-13
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0627900-01 |
9 |
75 |
230 |
29.13 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5525 |
Augustus |
mRNA |
29134 |
30002 |
. |
+ |
. |
ID=Dca46372.1;Parent=Dca46372 |
| scaffold5525 |
Augustus |
exon |
29134 |
29462 |
. |
+ |
. |
ID=Dca46372.1.exon1;Parent=Dca46372.1 |
| scaffold5525 |
Augustus |
exon |
29705 |
30002 |
. |
+ |
. |
ID=Dca46372.1.exon2;Parent=Dca46372.1 |
