Dca46395.1
Annotation
- 4-exons
- f-1
- sp|B9IL87_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_578310#GO:0005622;GO:0003676;GO:0008270#2F0P1C
- Os02t0793000-01 Zinc finger, CCCH-type domain containing protein.
- Repeat List (scaffold553)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46395.1 |
1 |
522 |
522 |
61.11 |
522 |
61 |
8e-163
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9IL87_POPTR |
1 |
495 |
495 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46395.1 |
11 |
522 |
522 |
54.4 |
512 |
54 |
2e-142
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os02t0793000-01 |
13 |
504 |
505 |
97.42 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold553 |
Augustus |
mRNA |
100609 |
104314 |
. |
+ |
. |
ID=Dca46395.1;Parent=Dca46395 |
| scaffold553 |
Augustus |
exon |
100609 |
100740 |
. |
+ |
. |
ID=Dca46395.1.exon1;Parent=Dca46395.1 |
| scaffold553 |
Augustus |
exon |
101219 |
101581 |
. |
+ |
. |
ID=Dca46395.1.exon2;Parent=Dca46395.1 |
| scaffold553 |
Augustus |
exon |
102749 |
102824 |
. |
+ |
. |
ID=Dca46395.1.exon3;Parent=Dca46395.1 |
| scaffold553 |
Augus-PASA |
exon |
103317 |
104314 |
. |
+ |
. |
ID=Dca46395.1.exon4;Parent=Dca46395.1 |
