Dca4645.1
Annotation
- 2-exons
- f-1
- sp|B2BXJ4_ARALL#LTRGag-pol-polymerase 3#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#Name=LTR3#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold11746)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4645.1 |
34 |
404 |
415 |
30.36 |
371 |
32 |
5e-44
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B2BXJ4_ARALL |
12 |
377 |
1296 |
28.24 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4645.1 |
30 |
285 |
415 |
21.92 |
256 |
36 |
5e-42
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G48050.1 |
9 |
255 |
369 |
66.93 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold11746 |
Augustus |
mRNA |
10247 |
11730 |
. |
+ |
. |
ID=Dca4645.1;Parent=Dca4645 |
| scaffold11746 |
Augustus |
exon |
10247 |
11456 |
. |
+ |
. |
ID=Dca4645.1.exon1;Parent=Dca4645.1 |
| scaffold11746 |
Augustus |
exon |
11693 |
11730 |
. |
+ |
. |
ID=Dca4645.1.exon2;Parent=Dca4645.1 |
