Carnation DB

Dca46575.1

Annotation

5-exons
f-1
sp|O65047_PICMA#Putative uncharacterized protein Sb07#Picea mariana (Black spruce) (Abies mariana)#Name=Sb07#unknown#0F0P0C
Repeat List (scaffold5579)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46575.1	60	214	214	49.53	155	69	1e-53
Target_name	Start	End	Length	Cov(%)
sp\|O65047_PICMA	6	158	158	96.83

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46575.1	58	214	214	49.06	157	67	9e-52
Target_name	Start	End	Length	Cov(%)
Os02t0201000-01	49	203	204	75.98

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5579	Augus-PASA	mRNA	8245	9766	.	-	.	ID=Dca46575.1;Parent=Dca46575
scaffold5579	Augus-PASA	exon	8245	8298	.	-	.	ID=Dca46575.1.exon1;Parent=Dca46575.1
scaffold5579	Augus-PASA	exon	8396	8462	.	-	.	ID=Dca46575.1.exon2;Parent=Dca46575.1
scaffold5579	Augus-PASA	exon	8841	8928	.	-	.	ID=Dca46575.1.exon3;Parent=Dca46575.1
scaffold5579	Augustus	exon	9041	9305	.	-	.	ID=Dca46575.1.exon4;Parent=Dca46575.1
scaffold5579	Augustus	exon	9596	9766	.	-	.	ID=Dca46575.1.exon5;Parent=Dca46575.1