Dca46590.1
Annotation
- 4-exons
- f-1
- sp|B9RCW8_RICCO#DNA binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1621620#unknown#0F0P0C
- Repeat List (scaffold5583)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46590.1 |
148 |
345 |
345 |
22.02 |
198 |
36 |
8e-23
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9RCW8_RICCO |
137 |
340 |
340 |
60 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46590.1 |
239 |
343 |
345 |
15.36 |
105 |
50 |
1e-21
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os10t0325400-01 |
290 |
395 |
396 |
26.76 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5583 |
Augustus |
mRNA |
15562 |
16869 |
. |
+ |
. |
ID=Dca46590.1;Parent=Dca46590 |
| scaffold5583 |
Augustus |
exon |
15562 |
15769 |
. |
+ |
. |
ID=Dca46590.1.exon1;Parent=Dca46590.1 |
| scaffold5583 |
Augustus |
exon |
15867 |
16416 |
. |
+ |
. |
ID=Dca46590.1.exon2;Parent=Dca46590.1 |
| scaffold5583 |
Augus-PASA |
exon |
16506 |
16587 |
. |
+ |
. |
ID=Dca46590.1.exon3;Parent=Dca46590.1 |
| scaffold5583 |
Augus-PASA |
exon |
16672 |
16869 |
. |
+ |
. |
ID=Dca46590.1.exon4;Parent=Dca46590.1 |
