Dca46696.1
Annotation
- 2-exons
- f-1
- sp|B1N668_SOLLC#Copia LTR rider#Solanum lycopersicum (Tomato) (Lycopersicon esculentum)#ORFNames=LYC_68t000004, SUNLYC_67t000007#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold56)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46696.1 |
1 |
81 |
442 |
10.18 |
81 |
56 |
5e-17
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B1N668_SOLLC |
1 |
70 |
1307 |
5.35 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46696.1 |
73 |
442 |
442 |
32.12 |
370 |
37 |
3e-60
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
664 |
1043 |
1401 |
27.12 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold56 |
Augustus |
mRNA |
378893 |
382377 |
. |
- |
. |
ID=Dca46696.1;Parent=Dca46696 |
| scaffold56 |
Augustus |
exon |
378893 |
380003 |
. |
- |
. |
ID=Dca46696.1.exon1;Parent=Dca46696.1 |
| scaffold56 |
Augustus |
exon |
382160 |
382377 |
. |
- |
. |
ID=Dca46696.1.exon2;Parent=Dca46696.1 |
