Carnation DB

Dca46924.1

Annotation

5-exons
f-1
sp|E5GBG5_CUCME#Ty1-copia retrotransposon protein#Cucumis melo subsp melo#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Repeat List (scaffold565)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46924.1	42	416	594	29.79	375	46	3e-85
Target_name	Start	End	Length	Cov(%)
sp\|E5GBG5_CUCME	127	475	1038	33.62

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46924.1	332	413	594	6.39	82	45	2e-13
Target_name	Start	End	Length	Cov(%)
Os03t0327700-01	1	86	87	98.85

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold565	Augustus	mRNA	125149	128902	.	-	.	ID=Dca46924.1;Parent=Dca46924
scaffold565	Augustus	exon	125149	125245	.	-	.	ID=Dca46924.1.exon1;Parent=Dca46924.1
scaffold565	Augustus	exon	126346	126512	.	-	.	ID=Dca46924.1.exon2;Parent=Dca46924.1
scaffold565	Augustus	exon	126948	127223	.	-	.	ID=Dca46924.1.exon3;Parent=Dca46924.1
scaffold565	Augustus	exon	127418	128538	.	-	.	ID=Dca46924.1.exon4;Parent=Dca46924.1
scaffold565	Augustus	exon	128779	128902	.	-	.	ID=Dca46924.1.exon5;Parent=Dca46924.1