Dca46952.1
Annotation
- 4-exons
- f-223
- sp|Q9FKA8_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003676;GO:0008270#2F0P0C
- Repeat List (scaffold5659)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46952.1 |
7 |
147 |
179 |
31.28 |
141 |
40 |
1e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9FKA8_ARATH |
42 |
181 |
370 |
37.83 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46952.1 |
16 |
169 |
179 |
27.37 |
154 |
32 |
5e-22
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G21280.1 |
41 |
193 |
237 |
64.55 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5659 |
Augustus |
mRNA |
4883 |
7323 |
. |
- |
. |
ID=Dca46952.1;Parent=Dca46952 |
| scaffold5659 |
Augustus |
exon |
4883 |
4995 |
. |
- |
. |
ID=Dca46952.1.exon1;Parent=Dca46952.1 |
| scaffold5659 |
Augustus |
exon |
5257 |
5684 |
. |
- |
. |
ID=Dca46952.1.exon2;Parent=Dca46952.1 |
| scaffold5659 |
Augustus |
exon |
7018 |
7200 |
. |
- |
. |
ID=Dca46952.1.exon3;Parent=Dca46952.1 |
| scaffold5659 |
Augustus |
exon |
7286 |
7323 |
. |
- |
. |
ID=Dca46952.1.exon4;Parent=Dca46952.1 |
