Dca46955.1
Annotation
- 4-exons
- f-1
- sp|D7LU58_ARALL#RNA-binding protein cp33#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_906606#GO:0003676;GO:0000166#2F0P0C
- Repeat List (scaffold566)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46955.1 |
24 |
299 |
306 |
49.01 |
276 |
55 |
1e-79
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7LU58_ARALL |
29 |
302 |
330 |
83.03 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46955.1 |
32 |
299 |
306 |
46.4 |
268 |
53 |
7e-78
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G52380.1 |
37 |
301 |
329 |
80.54 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold566 |
Augus-PASA |
mRNA |
37398 |
39413 |
. |
+ |
. |
ID=Dca46955.1;Parent=Dca46955 |
| scaffold566 |
Augus-PASA |
exon |
37398 |
37829 |
. |
+ |
. |
ID=Dca46955.1.exon1;Parent=Dca46955.1 |
| scaffold566 |
Augus-PASA |
exon |
38143 |
38244 |
. |
+ |
. |
ID=Dca46955.1.exon2;Parent=Dca46955.1 |
| scaffold566 |
Augus-PASA |
exon |
38817 |
39125 |
. |
+ |
. |
ID=Dca46955.1.exon3;Parent=Dca46955.1 |
| scaffold566 |
Augus-PASA |
exon |
39336 |
39413 |
. |
+ |
. |
ID=Dca46955.1.exon4;Parent=Dca46955.1 |
