Dca46996.1
Annotation
- 4-exons
- f-1
- sp|G5DW14_SILLA#50S ribosomal protein L6#Silene latifolia (White campion) (Bladder campion)#unknown#GO:0005840;GO:0019843;GO:0003735;GO:0006412#2F1P1C
- Repeat List (scaffold567)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46996.1 |
41 |
267 |
267 |
72.28 |
227 |
86 |
8e-108
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G5DW14_SILLA |
1 |
225 |
225 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46996.1 |
47 |
267 |
267 |
62.92 |
221 |
76 |
3e-96
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G05190.1 |
2 |
223 |
223 |
99.55 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold567 |
Augustus |
mRNA |
60057 |
62243 |
. |
+ |
. |
ID=Dca46996.1;Parent=Dca46996 |
| scaffold567 |
Augustus |
exon |
60057 |
60167 |
. |
+ |
. |
ID=Dca46996.1.exon1;Parent=Dca46996.1 |
| scaffold567 |
Augustus |
exon |
60443 |
60501 |
. |
+ |
. |
ID=Dca46996.1.exon2;Parent=Dca46996.1 |
| scaffold567 |
Augus-PASA |
exon |
61330 |
61626 |
. |
+ |
. |
ID=Dca46996.1.exon3;Parent=Dca46996.1 |
| scaffold567 |
Augus-PASA |
exon |
61907 |
62243 |
. |
+ |
. |
ID=Dca46996.1.exon4;Parent=Dca46996.1 |
