Carnation DB

Dca470.1

Annotation

7-exons
f-1
sp|D7LZ80_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_488833#GO:0003824;GO:0050662;GO:0000166;GO:0044237#3F1P0C
AT5G19440.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr5:6556493-6558123 FORWARD LENGTH=326
Repeat List (scaffold1008)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca470.1	2	320	393	53.43	319	66	3e-127
Target_name	Start	End	Length	Cov(%)
sp\|D7LZ80_ARALL	4	322	326	97.85

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca470.1	2	320	393	53.43	319	66	9e-128
Target_name	Start	End	Length	Cov(%)
AT5G19440.1	4	322	326	97.85

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1008	Augus-PASA	mRNA	33291	37096	.	+	.	ID=Dca470.1;Parent=Dca470
scaffold1008	Augus-PASA	exon	33291	33408	.	+	.	ID=Dca470.1.exon1;Parent=Dca470.1
scaffold1008	Augus-PASA	exon	33647	33816	.	+	.	ID=Dca470.1.exon2;Parent=Dca470.1
scaffold1008	Augus-PASA	exon	33920	34111	.	+	.	ID=Dca470.1.exon3;Parent=Dca470.1
scaffold1008	Augus-PASA	exon	34200	34362	.	+	.	ID=Dca470.1.exon4;Parent=Dca470.1
scaffold1008	Augustus	exon	34437	34623	.	+	.	ID=Dca470.1.exon5;Parent=Dca470.1
scaffold1008	Augustus	exon	34720	34848	.	+	.	ID=Dca470.1.exon6;Parent=Dca470.1
scaffold1008	Augustus	exon	36874	37096	.	+	.	ID=Dca470.1.exon7;Parent=Dca470.1