Dca47048.1
Annotation
- 2-exons
- f-1
- sp|B1N668_SOLLC#Copia LTR rider#Solanum lycopersicum (Tomato) (Lycopersicon esculentum)#ORFNames=LYC_68t000004, SUNLYC_67t000007#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold568)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47048.1 |
11 |
113 |
165 |
41.81 |
103 |
67 |
9e-37
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B1N668_SOLLC |
617 |
719 |
1307 |
7.88 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47048.1 |
10 |
152 |
165 |
30.9 |
143 |
35 |
2e-14
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
683 |
820 |
1401 |
9.85 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold568 |
Augustus |
mRNA |
105596 |
106678 |
. |
- |
. |
ID=Dca47048.1;Parent=Dca47048 |
| scaffold568 |
Augustus |
exon |
105596 |
106062 |
. |
- |
. |
ID=Dca47048.1.exon1;Parent=Dca47048.1 |
| scaffold568 |
Augustus |
exon |
106648 |
106678 |
. |
- |
. |
ID=Dca47048.1.exon2;Parent=Dca47048.1 |
