Dca47052.1
Annotation
- 4-exons
- f-1
- sp|Q6L3N8_SOLDE#Putative gag-pol polyprotein, identical#Solanum demissum (Wild potato)#ORFNames=SDM1_42t00010#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold568)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47052.1 |
100 |
154 |
288 |
14.58 |
55 |
74 |
3e-15
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q6L3N8_SOLDE |
594 |
650 |
1333 |
4.27 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47052.1 |
15 |
90 |
288 |
9.37 |
76 |
33 |
1e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
379 |
460 |
1401 |
5.85 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold568 |
Augustus |
mRNA |
151417 |
154542 |
. |
- |
. |
ID=Dca47052.1;Parent=Dca47052 |
| scaffold568 |
Augustus |
exon |
151417 |
151842 |
. |
- |
. |
ID=Dca47052.1.exon1;Parent=Dca47052.1 |
| scaffold568 |
Augustus |
exon |
152525 |
152669 |
. |
- |
. |
ID=Dca47052.1.exon2;Parent=Dca47052.1 |
| scaffold568 |
Augustus |
exon |
154123 |
154222 |
. |
- |
. |
ID=Dca47052.1.exon3;Parent=Dca47052.1 |
| scaffold568 |
Augustus |
exon |
154347 |
154542 |
. |
- |
. |
ID=Dca47052.1.exon4;Parent=Dca47052.1 |
