Dca47134.1
Annotation
- 2-exons
- f-1
- sp|A5BNR5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_035665#GO:0003676;GO:0000166;GO:0016491;GO:0008270;GO:0015074#4F1P0C
- AT1G21280.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:7447690-7448403 REVERSE LENGTH=237
- Repeat List (scaffold57)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47134.1 |
2 |
671 |
671 |
35.46 |
670 |
35 |
1e-107
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BNR5_VITVI |
292 |
950 |
1813 |
36.34 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47134.1 |
34 |
215 |
671 |
9.38 |
182 |
35 |
2e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G21280.1 |
41 |
225 |
237 |
78.05 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold57 |
Augustus |
mRNA |
131596 |
133686 |
. |
- |
. |
ID=Dca47134.1;Parent=Dca47134 |
| scaffold57 |
Augustus |
exon |
131596 |
132551 |
. |
- |
. |
ID=Dca47134.1.exon1;Parent=Dca47134.1 |
| scaffold57 |
Augustus |
exon |
132627 |
133686 |
. |
- |
. |
ID=Dca47134.1.exon2;Parent=Dca47134.1 |
