Carnation DB

Dca47152.1

Annotation

4-exons
f-1
sp|F6I277_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0210g00180#GO:0004449;GO:0000287;GO:0051287;GO:0006099#3F1P0C
AT4G35260.1 | Symbols: IDH1, IDH-I | isocitrate dehydrogenase 1 | chr4:16774494-16776233 REVERSE LENGTH=367
Repeat List (scaffold57)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47152.1	5	362	362	85.08	358	83	1e-179
Target_name	Start	End	Length	Cov(%)
sp\|F6I277_VITVI	4	375	375	99.2

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47152.1	1	362	362	83.42	362	82	6e-176
Target_name	Start	End	Length	Cov(%)
AT4G35260.1	1	367	367	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold57	Augus-PASA	mRNA	272959	276737	.	-	.	ID=Dca47152.1;Parent=Dca47152
scaffold57	Augus-PASA	exon	272959	273233	.	-	.	ID=Dca47152.1.exon1;Parent=Dca47152.1
scaffold57	Augus-PASA	exon	273343	273421	.	-	.	ID=Dca47152.1.exon2;Parent=Dca47152.1
scaffold57	Augus-PASA	exon	273986	274213	.	-	.	ID=Dca47152.1.exon3;Parent=Dca47152.1
scaffold57	Augus-PASA	exon	276231	276737	.	-	.	ID=Dca47152.1.exon4;Parent=Dca47152.1
scaffold57	Augus-PASA	mRNA	272959	276737	.	-	.	ID=Dca47152.2;Parent=Dca47152
scaffold57	Augus-PASA	exon	272959	273233	.	-	.	ID=Dca47152.2.exon1;Parent=Dca47152.2
scaffold57	Augus-PASA	exon	273343	273421	.	-	.	ID=Dca47152.2.exon2;Parent=Dca47152.2
scaffold57	Augus-PASA	exon	273986	274225	.	-	.	ID=Dca47152.2.exon3;Parent=Dca47152.2
scaffold57	Augus-PASA	exon	276231	276737	.	-	.	ID=Dca47152.2.exon4;Parent=Dca47152.2