Dca47198.1
Annotation
- 3-exons
- f-1
- sp|F4NCH8_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Os06t0484800-00 Reverse transcriptase domain containing protein.
- Repeat List (scaffold571)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47198.1 |
1 |
925 |
1057 |
31.88 |
925 |
35 |
3e-155
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCH8_BETVU |
80 |
1035 |
1365 |
70.03 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47198.1 |
1 |
819 |
1057 |
24.4 |
819 |
30 |
5e-98
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
1 |
850 |
857 |
99.18 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold571 |
Augustus |
mRNA |
56551 |
60378 |
. |
- |
. |
ID=Dca47198.1;Parent=Dca47198 |
| scaffold571 |
Augustus |
exon |
56551 |
56951 |
. |
- |
. |
ID=Dca47198.1.exon1;Parent=Dca47198.1 |
| scaffold571 |
Augustus |
exon |
57465 |
58593 |
. |
- |
. |
ID=Dca47198.1.exon2;Parent=Dca47198.1 |
| scaffold571 |
Augustus |
exon |
58735 |
60378 |
. |
- |
. |
ID=Dca47198.1.exon3;Parent=Dca47198.1 |
