Carnation DB

Dca4721.1

Annotation

6-exons
f-1
sp|B9HM18_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_563817#unknown#0F0P0C
Os05t0160100-01 CT11-RanBPM domain containing protein.
Repeat List (scaffold11784)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4721.1	6	249	249	80.32	244	82	8e-122
Target_name	Start	End	Length	Cov(%)
sp\|B9HM18_POPTR	169	412	412	59.22

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4721.1	7	249	249	77.51	243	80	2e-119
Target_name	Start	End	Length	Cov(%)
Os05t0160100-01	164	406	407	59.7

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold11784	Augustus	mRNA	2359	6809	.	-	.	ID=Dca4721.1;Parent=Dca4721
scaffold11784	Augustus	exon	2359	2460	.	-	.	ID=Dca4721.1.exon1;Parent=Dca4721.1
scaffold11784	Augustus	exon	2718	2904	.	-	.	ID=Dca4721.1.exon2;Parent=Dca4721.1
scaffold11784	Augustus	exon	3869	4002	.	-	.	ID=Dca4721.1.exon3;Parent=Dca4721.1
scaffold11784	Augustus	exon	4806	4991	.	-	.	ID=Dca4721.1.exon4;Parent=Dca4721.1
scaffold11784	Augustus	exon	6329	6451	.	-	.	ID=Dca4721.1.exon5;Parent=Dca4721.1
scaffold11784	Augustus	exon	6792	6809	.	-	.	ID=Dca4721.1.exon6;Parent=Dca4721.1