Dca47249.1
Annotation
- 3-exons
- f-1
- sp|A5BCQ9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_025518#GO:0003676;GO:0015074#1F1P0C
- Os11t0656500-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold5721)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47249.1 |
16 |
1457 |
1530 |
38.69 |
1442 |
40 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BCQ9_VITVI |
76 |
1456 |
1461 |
94.52 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47249.1 |
520 |
1441 |
1530 |
21.17 |
922 |
35 |
6e-151
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
478 |
1378 |
1401 |
64.31 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5721 |
Augustus |
mRNA |
11840 |
17507 |
. |
- |
. |
ID=Dca47249.1;Parent=Dca47249 |
| scaffold5721 |
Augustus |
exon |
11840 |
11997 |
. |
- |
. |
ID=Dca47249.1.exon1;Parent=Dca47249.1 |
| scaffold5721 |
Augustus |
exon |
12943 |
17114 |
. |
- |
. |
ID=Dca47249.1.exon2;Parent=Dca47249.1 |
| scaffold5721 |
Augustus |
exon |
17245 |
17507 |
. |
- |
. |
ID=Dca47249.1.exon3;Parent=Dca47249.1 |
