Dca47294.1
Annotation
- 3-exons
- f-1
- sp|F4NCG1_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Os06t0484800-00 Reverse transcriptase domain containing protein.
- Repeat List (scaffold5735)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47294.1 |
35 |
521 |
1004 |
19.32 |
487 |
40 |
1e-107
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCG1_BETVU |
278 |
767 |
1110 |
44.14 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47294.1 |
1 |
484 |
1004 |
15.13 |
484 |
32 |
1e-51
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
174 |
642 |
857 |
54.72 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5735 |
Augustus |
mRNA |
24762 |
33145 |
. |
+ |
. |
ID=Dca47294.1;Parent=Dca47294 |
| scaffold5735 |
Augustus |
exon |
24762 |
26334 |
. |
+ |
. |
ID=Dca47294.1.exon1;Parent=Dca47294.1 |
| scaffold5735 |
Augustus |
exon |
31628 |
32850 |
. |
+ |
. |
ID=Dca47294.1.exon2;Parent=Dca47294.1 |
| scaffold5735 |
Augustus |
exon |
32927 |
33145 |
. |
+ |
. |
ID=Dca47294.1.exon3;Parent=Dca47294.1 |
