Dca47308.1
Annotation
- 3-exons
- f-1
- sp|Q2AA09_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=20.t00008#GO:0003676;GO:0008270#2F0P0C
- Repeat List (scaffold574)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47308.1 |
1 |
146 |
274 |
20.07 |
146 |
32 |
4e-16
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2AA09_ASPOF |
57 |
230 |
275 |
63.27 |
AtOs (Arabidopsis thaliana & Oryza sativa)
No data
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold574 |
Augustus |
mRNA |
96961 |
97959 |
. |
+ |
. |
ID=Dca47308.1;Parent=Dca47308 |
| scaffold574 |
Augustus |
exon |
96961 |
97148 |
. |
+ |
. |
ID=Dca47308.1.exon1;Parent=Dca47308.1 |
| scaffold574 |
Augustus |
exon |
97224 |
97574 |
. |
+ |
. |
ID=Dca47308.1.exon2;Parent=Dca47308.1 |
| scaffold574 |
Augustus |
exon |
97674 |
97959 |
. |
+ |
. |
ID=Dca47308.1.exon3;Parent=Dca47308.1 |
