Carnation DB

Dca47354.1

Annotation

6-exons
f-1
sp|B9S1S8_RICCO#Cir, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0867880#GO:0003676;GO:0008270#2F0P0C
Repeat List (scaffold575)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47354.1	1	499	505	57.42	499	58	9e-140
Target_name	Start	End	Length	Cov(%)
sp\|B9S1S8_RICCO	1	459	506	90.71

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47354.1	2	300	505	44.15	299	73	2e-130
Target_name	Start	End	Length	Cov(%)
AT4G19190.1	4	309	595	51.42

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold575	Augus-PASA	mRNA	98321	101660	.	+	.	ID=Dca47354.1;Parent=Dca47354
scaffold575	Augus-PASA	exon	98321	98614	.	+	.	ID=Dca47354.1.exon1;Parent=Dca47354.1
scaffold575	Augus-PASA	exon	99409	99548	.	+	.	ID=Dca47354.1.exon2;Parent=Dca47354.1
scaffold575	Augus-PASA	exon	99652	99765	.	+	.	ID=Dca47354.1.exon3;Parent=Dca47354.1
scaffold575	Augus-PASA	exon	100115	100316	.	+	.	ID=Dca47354.1.exon4;Parent=Dca47354.1
scaffold575	Augus-PASA	exon	100525	100639	.	+	.	ID=Dca47354.1.exon5;Parent=Dca47354.1
scaffold575	Augus-PASA	exon	101008	101660	.	+	.	ID=Dca47354.1.exon6;Parent=Dca47354.1