Dca47364.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold5751)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47364.1 |
1 |
782 |
782 |
54.21 |
782 |
51 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
157 |
940 |
1501 |
52.23 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47364.1 |
282 |
773 |
782 |
26.47 |
492 |
42 |
3e-110
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
126 |
619 |
707 |
69.87 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5751 |
Augustus |
mRNA |
14558 |
17091 |
. |
- |
. |
ID=Dca47364.1;Parent=Dca47364 |
| scaffold5751 |
Augustus |
exon |
14558 |
16158 |
. |
- |
. |
ID=Dca47364.1.exon1;Parent=Dca47364.1 |
| scaffold5751 |
Augustus |
exon |
16246 |
16733 |
. |
- |
. |
ID=Dca47364.1.exon2;Parent=Dca47364.1 |
| scaffold5751 |
Augustus |
exon |
16832 |
17091 |
. |
- |
. |
ID=Dca47364.1.exon3;Parent=Dca47364.1 |
