Dca47487.1
Annotation
- 3-exons
- f-1
- sp|Q0PEL6_BETVU#Putative integrase#Beta vulgaris (Sugar beet)#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold5782)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47487.1 |
1 |
50 |
52 |
67.3 |
50 |
70 |
1e-15
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5F8_BETVU |
558 |
607 |
1516 |
3.29 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47487.1 |
90 |
269 |
443 |
17.83 |
180 |
44 |
3e-35
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
599 |
777 |
1401 |
12.77 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5782 |
Augustus |
mRNA |
9599 |
11673 |
. |
+ |
. |
ID=Dca47487.1;Parent=Dca47487 |
| scaffold5782 |
Augustus |
exon |
9599 |
9722 |
. |
+ |
. |
ID=Dca47487.1.exon1;Parent=Dca47487.1 |
| scaffold5782 |
Augustus |
exon |
9847 |
9979 |
. |
+ |
. |
ID=Dca47487.1.exon2;Parent=Dca47487.1 |
| scaffold5782 |
Augustus |
exon |
10599 |
11673 |
. |
+ |
. |
ID=Dca47487.1.exon3;Parent=Dca47487.1 |
