Carnation DB

Dca475.1

Annotation

7-exons
f-1
sp|C6T7Y2_SOYBN#Putative uncharacterized protein#Glycine max (Soybean) (Glycine hispida)#unknown#GO:0008270#1F0P0C
sp|G7JDP3_MEDTR#E3 ubiquitin-protein ligase#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_4g065670#GO:0016874;GO:0008270#2F0P0C
Repeat List (scaffold1008)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca475.1	1	269	272	51.83	269	52	6e-70
Target_name	Start	End	Length	Cov(%)
sp\|C6T7Y2_SOYBN	1	246	248	99.19

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca475.1	1	270	272	42.64	270	43	2e-52
Target_name	Start	End	Length	Cov(%)
Os03t0173900-01	1	249	251	99.2

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1008	Augustus	mRNA	53755	55996	.	-	.	ID=Dca475.1;Parent=Dca475
scaffold1008	Augustus	exon	53755	53811	.	-	.	ID=Dca475.1.exon1;Parent=Dca475.1
scaffold1008	Augustus	exon	53915	54023	.	-	.	ID=Dca475.1.exon2;Parent=Dca475.1
scaffold1008	Augustus	exon	54324	54448	.	-	.	ID=Dca475.1.exon3;Parent=Dca475.1
scaffold1008	Augustus	exon	54555	54599	.	-	.	ID=Dca475.1.exon4;Parent=Dca475.1
scaffold1008	Augustus	exon	54955	54986	.	-	.	ID=Dca475.1.exon5;Parent=Dca475.1
scaffold1008	Augustus	exon	55321	55630	.	-	.	ID=Dca475.1.exon6;Parent=Dca475.1
scaffold1008	Augustus	exon	55856	55996	.	-	.	ID=Dca475.1.exon7;Parent=Dca475.1