Carnation DB

Dca47520.1

Annotation

5-exons
f-1
sp|B9SHK7_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1122740#unknown#0F0P0C
Os12t0430900-00 Similar to T27G7.21.
Repeat List (scaffold579)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47520.1	29	171	174	54.59	143	67	3e-49
Target_name	Start	End	Length	Cov(%)
sp\|B9SHK7_RICCO	129	271	283	50.53

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47520.1	23	169	174	50.57	147	59	1e-45
Target_name	Start	End	Length	Cov(%)
AT1G08530.1	106	255	257	58.36

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold579	Augustus	mRNA	85601	88508	.	+	.	ID=Dca47520.1;Parent=Dca47520
scaffold579	Augustus	exon	85601	85684	.	+	.	ID=Dca47520.1.exon1;Parent=Dca47520.1
scaffold579	Augus-PASA	exon	87089	87139	.	+	.	ID=Dca47520.1.exon2;Parent=Dca47520.1
scaffold579	Augus-PASA	exon	87415	87548	.	+	.	ID=Dca47520.1.exon3;Parent=Dca47520.1
scaffold579	Augus-PASA	exon	88167	88267	.	+	.	ID=Dca47520.1.exon4;Parent=Dca47520.1
scaffold579	Augustus	exon	88354	88508	.	+	.	ID=Dca47520.1.exon5;Parent=Dca47520.1