Carnation DB

Dca47553.1

Annotation

5-exons
f-1
sp|C6T3T8_SOYBN#Putative uncharacterized protein#Glycine max (Soybean) (Glycine hispida)#unknown#GO:0005488#1F0P0C
Os05t0383000-02 Tetratricopeptide-like helical domain containing protein.
Repeat List (scaffold58)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47553.1	1	156	157	73.24	156	69	1e-58
Target_name	Start	End	Length	Cov(%)
sp\|C6T3T8_SOYBN	1	166	167	99.4

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47553.1	1	157	157	69.42	157	65	8e-55
Target_name	Start	End	Length	Cov(%)
Os05t0383000-02	1	164	165	99.39

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold58	Augus-PASA	mRNA	53995	55988	.	+	.	ID=Dca47553.1;Parent=Dca47553
scaffold58	Augus-PASA	exon	53995	54087	.	+	.	ID=Dca47553.1.exon1;Parent=Dca47553.1
scaffold58	Augus-PASA	exon	54720	54861	.	+	.	ID=Dca47553.1.exon2;Parent=Dca47553.1
scaffold58	Augus-PASA	exon	55280	55404	.	+	.	ID=Dca47553.1.exon3;Parent=Dca47553.1
scaffold58	Augustus	exon	55795	55822	.	+	.	ID=Dca47553.1.exon4;Parent=Dca47553.1
scaffold58	Augus-PASA	exon	55903	55988	.	+	.	ID=Dca47553.1.exon5;Parent=Dca47553.1