Carnation DB

Dca47958.1

Annotation

5-exons
f-1
sp|B9RLM0_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1469440#unknown#0F0P0C
AT4G26190.1 | Symbols: | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr4:13262473-13266282 REVERSE LENGTH=1057
Repeat List (scaffold587)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47958.1	868	1079	1102	11.34	212	57	1e-74
Target_name	Start	End	Length	Cov(%)
sp\|B9RLM0_RICCO	337	559	576	38.71

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47958.1	819	1076	1102	10.25	258	43	3e-61
Target_name	Start	End	Length	Cov(%)
AT4G26190.1	783	1051	1057	25.44

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold587	Augustus	mRNA	58795	63984	.	-	.	ID=Dca47958.1;Parent=Dca47958
scaffold587	Augustus	exon	58795	59009	.	-	.	ID=Dca47958.1.exon1;Parent=Dca47958.1
scaffold587	Augustus	exon	59597	59657	.	-	.	ID=Dca47958.1.exon2;Parent=Dca47958.1
scaffold587	Augustus	exon	59806	59991	.	-	.	ID=Dca47958.1.exon3;Parent=Dca47958.1
scaffold587	Augustus	exon	61042	61157	.	-	.	ID=Dca47958.1.exon4;Parent=Dca47958.1
scaffold587	Augustus	exon	61254	63984	.	-	.	ID=Dca47958.1.exon5;Parent=Dca47958.1