Carnation DB

Dca47960.1

Annotation

6-exons
f-1
sp|B9RLM0_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1469440#unknown#0F0P0C
AT4G26190.1 | Symbols: | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr4:13262473-13266282 REVERSE LENGTH=1057
Repeat List (scaffold587)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47960.1	36	251	270	48.88	216	62	1e-79
Target_name	Start	End	Length	Cov(%)
sp\|B9RLM0_RICCO	347	562	576	37.5

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47960.1	34	245	270	38.88	212	50	6e-59
Target_name	Start	End	Length	Cov(%)
AT4G26190.1	841	1051	1057	19.96

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold587	Augustus	mRNA	70356	71663	.	+	.	ID=Dca47960.1;Parent=Dca47960
scaffold587	Augustus	exon	70356	70560	.	+	.	ID=Dca47960.1.exon1;Parent=Dca47960.1
scaffold587	Augustus	exon	70694	70775	.	+	.	ID=Dca47960.1.exon2;Parent=Dca47960.1
scaffold587	Augustus	exon	70863	70929	.	+	.	ID=Dca47960.1.exon3;Parent=Dca47960.1
scaffold587	Augustus	exon	71040	71225	.	+	.	ID=Dca47960.1.exon4;Parent=Dca47960.1
scaffold587	Augustus	exon	71311	71371	.	+	.	ID=Dca47960.1.exon5;Parent=Dca47960.1
scaffold587	Augustus	exon	71452	71663	.	+	.	ID=Dca47960.1.exon6;Parent=Dca47960.1