Dca47978.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold5874)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47978.1 |
1 |
1122 |
1123 |
55.38 |
1122 |
52 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
146 |
1327 |
1501 |
78.74 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47978.1 |
197 |
1088 |
1123 |
28.85 |
892 |
35 |
6e-157
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
411 |
1287 |
1539 |
56.98 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5874 |
Augustus |
mRNA |
1 |
3497 |
. |
+ |
. |
ID=Dca47978.1;Parent=Dca47978 |
| scaffold5874 |
Augustus |
exon |
1 |
2737 |
. |
+ |
. |
ID=Dca47978.1.exon1;Parent=Dca47978.1 |
| scaffold5874 |
Augustus |
exon |
2863 |
3497 |
. |
+ |
. |
ID=Dca47978.1.exon2;Parent=Dca47978.1 |
