Carnation DB

Dca48041.1

Annotation

20-exons
f-379
sp|B9SQW7_RICCO#Eukaryotic translation initiation factor 3 subunit, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1404940#GO:0003743#1F0P0C
Repeat List (scaffold589)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48041.1	1	1518	1531	68.38	1518	65	0
Target_name	Start	End	Length	Cov(%)
sp\|B9SQW7_RICCO	296	1888	1888	84.37

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48041.1	1	1518	1531	62.11	1518	60	0
Target_name	Start	End	Length	Cov(%)
AT4G28080.1	289	1819	1819	84.16

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold589	Augustus	mRNA	45948	60905	.	+	.	ID=Dca48041.1;Parent=Dca48041
scaffold589	Augustus	exon	45948	46017	.	+	.	ID=Dca48041.1.exon1;Parent=Dca48041.1
scaffold589	Augustus	exon	51528	51752	.	+	.	ID=Dca48041.1.exon2;Parent=Dca48041.1
scaffold589	Augustus	exon	53919	53986	.	+	.	ID=Dca48041.1.exon3;Parent=Dca48041.1
scaffold589	Augustus	exon	54073	54114	.	+	.	ID=Dca48041.1.exon4;Parent=Dca48041.1
scaffold589	Augustus	exon	54193	54705	.	+	.	ID=Dca48041.1.exon5;Parent=Dca48041.1
scaffold589	Augustus	exon	54822	54979	.	+	.	ID=Dca48041.1.exon6;Parent=Dca48041.1
scaffold589	Augustus	exon	55080	55584	.	+	.	ID=Dca48041.1.exon7;Parent=Dca48041.1
scaffold589	Augustus	exon	55816	55878	.	+	.	ID=Dca48041.1.exon8;Parent=Dca48041.1
scaffold589	Augustus	exon	55958	56059	.	+	.	ID=Dca48041.1.exon9;Parent=Dca48041.1
scaffold589	Augustus	exon	56172	56492	.	+	.	ID=Dca48041.1.exon10;Parent=Dca48041.1
scaffold589	Augustus	exon	56585	56677	.	+	.	ID=Dca48041.1.exon11;Parent=Dca48041.1
scaffold589	Augustus	exon	56757	56858	.	+	.	ID=Dca48041.1.exon12;Parent=Dca48041.1
scaffold589	Augustus	exon	56954	57058	.	+	.	ID=Dca48041.1.exon13;Parent=Dca48041.1
scaffold589	Augustus	exon	57231	57364	.	+	.	ID=Dca48041.1.exon14;Parent=Dca48041.1
scaffold589	Augustus	exon	57731	57914	.	+	.	ID=Dca48041.1.exon15;Parent=Dca48041.1
scaffold589	Augustus	exon	58040	58171	.	+	.	ID=Dca48041.1.exon16;Parent=Dca48041.1
scaffold589	Augustus	exon	58305	58417	.	+	.	ID=Dca48041.1.exon17;Parent=Dca48041.1
scaffold589	Augustus	exon	58669	58750	.	+	.	ID=Dca48041.1.exon18;Parent=Dca48041.1
scaffold589	Augustus	exon	58850	60768	.	+	.	ID=Dca48041.1.exon19;Parent=Dca48041.1
scaffold589	Augustus	exon	60863	60905	.	+	.	ID=Dca48041.1.exon20;Parent=Dca48041.1