Carnation DB

Dca48110.1

Annotation

12-exons
f-1
sp|D7TB83_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0016g02270#unknown#0F0P0C
sp|B9SP08_RICCO#WD-repeat protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1247510#GO:0004402#1F0P0C
Repeat List (scaffold59)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48110.1	1	473	473	73.99	473	74	0
Target_name	Start	End	Length	Cov(%)
sp\|D7TB83_VITVI	1	474	474	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48110.1	26	469	473	65.53	444	70	6e-175
Target_name	Start	End	Length	Cov(%)
AT2G19540.1	20	464	469	94.88

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold59	Augustus	mRNA	358502	363405	.	+	.	ID=Dca48110.1;Parent=Dca48110
scaffold59	Augustus	exon	358502	358552	.	+	.	ID=Dca48110.1.exon1;Parent=Dca48110.1
scaffold59	Augustus	exon	358680	358843	.	+	.	ID=Dca48110.1.exon2;Parent=Dca48110.1
scaffold59	Augustus	exon	360058	360136	.	+	.	ID=Dca48110.1.exon3;Parent=Dca48110.1
scaffold59	Augustus	exon	360452	360628	.	+	.	ID=Dca48110.1.exon4;Parent=Dca48110.1
scaffold59	Augustus	exon	360787	360885	.	+	.	ID=Dca48110.1.exon5;Parent=Dca48110.1
scaffold59	Augustus	exon	361027	361192	.	+	.	ID=Dca48110.1.exon6;Parent=Dca48110.1
scaffold59	Augustus	exon	361321	361427	.	+	.	ID=Dca48110.1.exon7;Parent=Dca48110.1
scaffold59	Augustus	exon	361847	361986	.	+	.	ID=Dca48110.1.exon8;Parent=Dca48110.1
scaffold59	Augustus	exon	362077	362149	.	+	.	ID=Dca48110.1.exon9;Parent=Dca48110.1
scaffold59	Augustus	exon	362228	362343	.	+	.	ID=Dca48110.1.exon10;Parent=Dca48110.1
scaffold59	Augustus	exon	362442	362559	.	+	.	ID=Dca48110.1.exon11;Parent=Dca48110.1
scaffold59	Augustus	exon	363274	363405	.	+	.	ID=Dca48110.1.exon12;Parent=Dca48110.1