Carnation DB

Dca48150.1

Annotation

11-exons
f-1
sp|D7T6A3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0020g00940#GO:0005524;GO:0003677;GO:0004386#3F0P0C
sp|B9S022_RICCO#Chromatin remodelling complex ATPase chain isw-1, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1004020#GO:0005524;GO:0003677;GO:0004386;GO:0016740#4F0P0C
Repeat List (scaffold591)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48150.1	1	317	342	61.4	317	65	1e-105
Target_name	Start	End	Length	Cov(%)
sp\|D7T6A3_VITVI	1	319	677	47.11

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48150.1	3	317	342	54.09	315	58	1e-98
Target_name	Start	End	Length	Cov(%)
AT1G48310.1	2	306	673	45.31

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold591	Augus-PASA	mRNA	24913	31075	.	+	.	ID=Dca48150.1;Parent=Dca48150
scaffold591	Augus-PASA	exon	24913	25083	.	+	.	ID=Dca48150.1.exon1;Parent=Dca48150.1
scaffold591	Augustus	exon	26287	26344	.	+	.	ID=Dca48150.1.exon2;Parent=Dca48150.1
scaffold591	Augus-PASA	exon	26459	26547	.	+	.	ID=Dca48150.1.exon3;Parent=Dca48150.1
scaffold591	Augus-PASA	exon	26636	26691	.	+	.	ID=Dca48150.1.exon4;Parent=Dca48150.1
scaffold591	Augus-PASA	exon	26785	26854	.	+	.	ID=Dca48150.1.exon5;Parent=Dca48150.1
scaffold591	Augus-PASA	exon	27082	27148	.	+	.	ID=Dca48150.1.exon6;Parent=Dca48150.1
scaffold591	Augus-PASA	exon	27857	27923	.	+	.	ID=Dca48150.1.exon7;Parent=Dca48150.1
scaffold591	Augus-PASA	exon	28093	28159	.	+	.	ID=Dca48150.1.exon8;Parent=Dca48150.1
scaffold591	Augus-PASA	exon	30112	30195	.	+	.	ID=Dca48150.1.exon9;Parent=Dca48150.1
scaffold591	Augus-PASA	exon	30302	30343	.	+	.	ID=Dca48150.1.exon10;Parent=Dca48150.1
scaffold591	Augus-PASA	exon	30818	31075	.	+	.	ID=Dca48150.1.exon11;Parent=Dca48150.1