Carnation DB

Dca48163.1

Annotation

6-exons
f-1
sp|A9PAQ9_POPTR#Peptidyl-prolyl cis-trans isomerase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_723047#GO:0003755;GO:0006457#1F1P0C
Repeat List (scaffold5910)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48163.1	1	163	163	80.98	163	81	7e-74
Target_name	Start	End	Length	Cov(%)
sp\|A9PAQ9_POPTR	1	162	207	78.26

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48163.1	10	163	163	76.68	154	82	2e-69
Target_name	Start	End	Length	Cov(%)
Os06t0708500-02	23	175	221	69.23

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5910	Augustus	mRNA	13252	14640	.	+	.	ID=Dca48163.1;Parent=Dca48163
scaffold5910	Augustus	exon	13252	13326	.	+	.	ID=Dca48163.1.exon1;Parent=Dca48163.1
scaffold5910	Augustus	exon	13480	13561	.	+	.	ID=Dca48163.1.exon2;Parent=Dca48163.1
scaffold5910	Augustus	exon	13985	14032	.	+	.	ID=Dca48163.1.exon3;Parent=Dca48163.1
scaffold5910	Augustus	exon	14122	14145	.	+	.	ID=Dca48163.1.exon4;Parent=Dca48163.1
scaffold5910	Augustus	exon	14292	14474	.	+	.	ID=Dca48163.1.exon5;Parent=Dca48163.1
scaffold5910	Augustus	exon	14561	14640	.	+	.	ID=Dca48163.1.exon6;Parent=Dca48163.1