Dca48273.1
Annotation
- 2-exons
- f-1
- sp|Q9ZQ67_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g14380#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold5938)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48273.1 |
3 |
187 |
196 |
52.55 |
185 |
46 |
2e-48
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZQ67_ARATH |
376 |
599 |
764 |
29.31 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48273.1 |
92 |
186 |
196 |
16.83 |
95 |
35 |
6e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
27 |
120 |
591 |
15.9 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5938 |
Augustus |
mRNA |
2541 |
3550 |
. |
- |
. |
ID=Dca48273.1;Parent=Dca48273 |
| scaffold5938 |
Augustus |
exon |
2541 |
2909 |
. |
- |
. |
ID=Dca48273.1.exon1;Parent=Dca48273.1 |
| scaffold5938 |
Augustus |
exon |
3329 |
3550 |
. |
- |
. |
ID=Dca48273.1.exon2;Parent=Dca48273.1 |
