Dca48304.1
Annotation
- 2-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold5941)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48304.1 |
1 |
282 |
372 |
50.26 |
282 |
66 |
2e-107
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
598 |
882 |
896 |
31.8 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48304.1 |
1 |
266 |
372 |
23.11 |
266 |
33 |
2e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1109 |
1363 |
1401 |
18.2 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5941 |
Augustus |
mRNA |
32450 |
36104 |
. |
+ |
. |
ID=Dca48304.1;Parent=Dca48304 |
| scaffold5941 |
Augustus |
exon |
32450 |
33242 |
. |
+ |
. |
ID=Dca48304.1.exon1;Parent=Dca48304.1 |
| scaffold5941 |
Augustus |
exon |
35779 |
36104 |
. |
+ |
. |
ID=Dca48304.1.exon2;Parent=Dca48304.1 |
