Carnation DB

Dca48337.1

Annotation

8-exons
f-1
sp|B9H311_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_648034#GO:0004045#1F0P0C
sp|B9RSL9_RICCO#Peptidyl-tRNA hydrolase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1726890#GO:0004045#1F0P0C
Repeat List (scaffold5952)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48337.1	4	209	209	80.38	206	82	7e-99
Target_name	Start	End	Length	Cov(%)
sp\|B9H311_POPTR	38	244	244	84.83

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48337.1	10	209	209	73.2	200	77	6e-89
Target_name	Start	End	Length	Cov(%)
AT5G16140.1	41	240	240	83.33

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5952	Augustus	mRNA	1212	3812	.	-	.	ID=Dca48337.1;Parent=Dca48337
scaffold5952	Augustus	exon	1212	1328	.	-	.	ID=Dca48337.1.exon1;Parent=Dca48337.1
scaffold5952	Augustus	exon	1577	1653	.	-	.	ID=Dca48337.1.exon2;Parent=Dca48337.1
scaffold5952	Augustus	exon	1756	1814	.	-	.	ID=Dca48337.1.exon3;Parent=Dca48337.1
scaffold5952	Augustus	exon	2067	2140	.	-	.	ID=Dca48337.1.exon4;Parent=Dca48337.1
scaffold5952	Augustus	exon	2232	2282	.	-	.	ID=Dca48337.1.exon5;Parent=Dca48337.1
scaffold5952	Augustus	exon	2888	2955	.	-	.	ID=Dca48337.1.exon6;Parent=Dca48337.1
scaffold5952	Augustus	exon	3081	3165	.	-	.	ID=Dca48337.1.exon7;Parent=Dca48337.1
scaffold5952	Augustus	exon	3714	3812	.	-	.	ID=Dca48337.1.exon8;Parent=Dca48337.1